I am using the mega48 in the stk500. I also have the jtag mkii connected using the debug wire(s). When this is conected, the normal 6 pin isp cable is replaced by the jtagice wires (at sprog2 header). So how can new programs be quickly fixed and down loaded? Must you contiinuously swap wires around? i'd like to be able to download corrected code & immediately be able to run & trace it with the mkII.
My understanding is that the mkII WILL NOT download your code, it can only reprogram=m the debug wire bit.
Is there a better way to make the connection?